GLmol -- Molecular Viewer on A-Frame/Socket.IO/Javascript
Version 1 (2019.02.1)

This program is written by biochem_fan, Bazal1, and Dave Graff, and released under LGPL. Please visit our project page for the details and source code distribution.

Comments and Suggestions are welcome. Please email SBUtltmedia.

How to use

• Rotate: left mouse button

You can load PDB, SDF/MOL(MDL not SYBYL) or XYZ files


From the RCSB PDB server PDBID: Download

From the PubChem server Compound ID(CID): Download

From your local disk: Load from file
(Don't worry, your file will not be uploaded)

Color by spectrum chain secondary structure B factor polar/nonpolar
Main chain as thick ribbon thin ribbon(faster) strand cylinder & plate C alpha trace B factor Tube bonds (everything)
Nucleic acid bases as sticks lines polygons
Side chains as lines
Don't smooth beta-sheets in ribbons
Non-bonded atoms (solvent/ions) as spheres stars
Small molecules(HETATMs) as sticks ball and stick ball and stick (multiple bond) spheres icosahedrons lines
Multiple bond option is for SDF/MOL file ONLY.
Unit cell
Biological assembly (the last one defined)
Crystal packing
Show HETATMs in symmetry mates (slower)

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